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fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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[auto] Update dependencies in `poetry.lock` #743

Closed tcompa closed 1 month ago

tcompa commented 1 month ago

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 4 updates, 0 removals

  - Updating zipp (3.18.1 -> 3.18.2)
  - Updating fsspec (2024.3.1 -> 2024.5.0)
  - Updating dask (2024.5.0 -> 2024.5.1)
  - Updating zarr (2.18.0 -> 2.18.1)

Writing lock file

Outdated dependencies before PR:

cellpose                   (!) 2.2.3      3.0.8     anatomical segmentation ...
dask                           2024.5.0   2024.5.1  Parallel PyData with Tas...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.14.0    A platform independent f...
fsspec                         2024.3.1   2024.5.0  File-system specification
ipython                    (!) 8.18.1     8.24.0    IPython: Productive Inte...
jupyterlab                 (!) 4.1.8      4.2.0     JupyterLab computational...
lit                        (!) 18.1.4     18.1.6    A Software Testing Tool
lxml                           4.9.4      5.2.2     Powerful and Pythonic XM...
matplotlib                 (!) 3.8.4      3.9.0     Python plotting package
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
notebook                   (!) 7.1.3      7.2.0     Jupyter Notebook - A web...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.1.17  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
platformdirs               (!) 4.2.1      4.2.2     A small Python package f...
pooch                      (!) 1.8.0      1.8.1     "Pooch manages your Pyth...
pydantic                       1.10.15    2.7.1     Data validation and sett...
requests                   (!) 2.31.0     2.32.1    Python HTTP for Humans.
scikit-image               (!) 0.22.0     0.23.2    Image processing in Python
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.3.0     Tensors and Dynamic neur...
triton                     (!) 2.0.0      2.3.0     A language and compiler ...
zarr                           2.18.0     2.18.1    An implementation of chu...
zipp                           3.18.1     3.18.2    Backport of pathlib-comp...

Outdated dependencies after PR:

cellpose                   (!) 2.2.3      3.0.8     anatomical segmentation ...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.14.0    A platform independent f...
ipython                    (!) 8.18.1     8.24.0    IPython: Productive Inte...
lxml                           4.9.4      5.2.2     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.1.17  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.1     "Pooch manages your Pyth...
pydantic                       1.10.15    2.7.1     Data validation and sett...
scikit-image               (!) 0.22.0     0.23.2    Image processing in Python
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.3.0     Tensors and Dynamic neur...
triton                     (!) 2.0.0      2.3.0     A language and compiler ...

Note: there may be dependencies in the table above which were not updated as part of this PR. The reason is they require manual updating due to the way they are pinned.

github-actions[bot] commented 1 month ago

Coverage report

This PR does not seem to contain any modification to coverable code.