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fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
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[auto] Update dependencies in `poetry.lock` #774

Closed tcompa closed 3 months ago

tcompa commented 3 months ago

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 4 updates, 0 removals

  - Updating pydantic-core (2.18.4 -> 2.20.0)
  - Updating pydantic (2.7.4 -> 2.8.0)
  - Updating fsspec (2024.6.0 -> 2024.6.1)
  - Updating importlib-metadata (7.2.1 -> 8.0.0)

Writing lock file

Outdated dependencies before PR:

cellpose                   (!) 2.2.3      3.0.10    anatomical segmentation ...
debugpy                    (!) 1.8.1      1.8.2     An implementation of the...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.15.4    A platform independent f...
fsspec                         2024.6.0   2024.6.1  File-system specification
imageio-ffmpeg             (!) 0.4.9      0.5.1     FFMPEG wrapper for Python
importlib-metadata             7.2.1      8.0.0     Read metadata from Pytho...
ipykernel                  (!) 6.29.4     6.29.5    IPython Kernel for Jupyter
ipython                    (!) 8.18.1     8.26.0    IPython: Productive Inte...
jupyterlab                 (!) 4.2.2      4.2.3     JupyterLab computational...
lit                        (!) 18.1.7     18.1.8    A Software Testing Tool
lxml                           4.9.4      5.2.2     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
numpy                          1.26.4     2.0.0     Fundamental package for ...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.1.17  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pillow                     (!) 10.3.0     10.4.0    Python Imaging Library (...
pooch                      (!) 1.8.0      1.8.2     "Pooch manages your Pyth...
pydantic                       2.7.4      2.8.0     Data validation using Py...
pydantic-core                  2.18.4     2.20.0    Core functionality for P...
scipy                          1.13.1     1.14.0    Fundamental algorithms f...
setuptools                     70.1.0     70.2.0    Easily download, build, ...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.3.1     Tensors and Dynamic neur...
triton                     (!) 2.0.0      2.3.1     A language and compiler ...

Outdated dependencies after PR:

cellpose                   (!) 2.2.3      3.0.10    anatomical segmentation ...
docstring-parser               0.15       0.16      Parse Python docstrings ...
executing                  (!) 0.10.0     2.0.1     Get the currently execut...
filelock                       3.13.4     3.15.4    A platform independent f...
imageio-ffmpeg             (!) 0.4.9      0.5.1     FFMPEG wrapper for Python
ipython                    (!) 8.18.1     8.26.0    IPython: Productive Inte...
lxml                           4.9.4      5.2.2     Powerful and Pythonic XM...
napari-skimage-regionprops (!) 0.8.2      0.10.1    A regionprops table widg...
networkx                   (!) 3.2.1      3.3       Python package for creat...
numpy                          1.26.4     2.0.0     Fundamental package for ...
nvidia-cublas-cu11         (!) 11.10.3.66 11.11.3.6 CUBLAS native runtime li...
nvidia-cuda-cupti-cu11     (!) 11.7.101   11.8.87   CUDA profiling tools run...
nvidia-cuda-nvrtc-cu11     (!) 11.7.99    11.8.89   NVRTC native runtime lib...
nvidia-cuda-runtime-cu11   (!) 11.7.99    11.8.89   CUDA Runtime native Libr...
nvidia-cudnn-cu11          (!) 8.5.0.96   9.1.1.17  cuDNN runtime libraries
nvidia-curand-cu11         (!) 10.2.10.91 10.3.0.86 CURAND native runtime li...
nvidia-cusolver-cu11       (!) 11.4.0.1   11.4.1.48 CUDA solver native runti...
nvidia-cusparse-cu11       (!) 11.7.4.91  11.7.5.86 CUSPARSE native runtime ...
nvidia-nccl-cu11           (!) 2.14.3     2.21.5    NVIDIA Collective Commun...
nvidia-nvtx-cu11           (!) 11.7.91    11.8.86   NVIDIA Tools Extension
pandas                         1.5.3      2.2.2     Powerful data structures...
pooch                      (!) 1.8.0      1.8.2     "Pooch manages your Pyth...
scipy                          1.13.1     1.14.0    Fundamental algorithms f...
stack-data                 (!) 0.5.1      0.6.3     Extract data from python...
torch                      (!) 2.0.0      2.3.1     Tensors and Dynamic neur...
triton                     (!) 2.0.0      2.3.1     A language and compiler ...

Note: there may be dependencies in the table above which were not updated as part of this PR. The reason is they require manual updating due to the way they are pinned.

github-actions[bot] commented 3 months ago

Coverage report

This PR does not seem to contain any modification to coverable code.