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fractal-analytics-platform / fractal-tasks-core

Main tasks for the Fractal analytics platform
https://fractal-analytics-platform.github.io/fractal-tasks-core/
BSD 3-Clause "New" or "Revised" License
14 stars 6 forks source link

[auto] Update dependencies in `poetry.lock` #868

Closed tcompa closed 1 week ago

tcompa commented 1 week ago

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 2 updates, 0 removals

  - Updating packaging (24.1 -> 24.2)
  - Updating zipp (3.20.2 -> 3.21.0)

Writing lock file

Outdated dependencies before PR:

alabaster                                      (!) 0.7.16             
anndata                                            0.10.9             
astropy                                        (!) 6.0.1              
astropy-iers-data                              (!) 0.2024.11.4.0.33.34
cellpose                                       (!) 2.2.3              
contourpy                                      (!) 1.3.0              
dask                                               2024.8.0           
debugpy                                        (!) 1.8.7              
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
filelock                                           3.13.4             
flexparser                                     (!) 0.3.1              
fonttools                                      (!) 4.54.1             
httpcore                                       (!) 1.0.6              
imageio-ffmpeg                                 (!) 0.4.9              
ipython                                        (!) 8.18.1             
jedi                                           (!) 0.19.1             
json5                                          (!) 0.9.25             
jupyterlab                                     (!) 4.2.5              
lxml                                               4.9.4              
napari-console                                 (!) 0.1.0              
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
networkx                                       (!) 3.2.1              
numcodecs                                          0.12.1             
numpy                                              1.26.4             
nvidia-cublas-cu12                             (!) 12.4.5.8           
nvidia-cuda-cupti-cu12                         (!) 12.4.127           
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127           
nvidia-cuda-runtime-cu12                       (!) 12.4.127           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.2.1.3           
nvidia-curand-cu12                             (!) 10.3.5.147         
nvidia-cusolver-cu12                           (!) 11.6.1.9           
nvidia-cusparse-cu12                           (!) 12.3.1.170         
nvidia-nccl-cu12                               (!) 2.21.5             
nvidia-nvjitlink-cu12                          (!) 12.4.127           
nvidia-nvtx-cu12                               (!) 12.4.127           
packaging                                          24.1               
pint                                           (!) 0.24.3             
pooch                                          (!) 1.8.0              
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pyerfa                                         (!) 2.0.1.4            
pytest                                         (!) 7.4.4              
rpds-py                                        (!) 0.20.1             
scipy                                              1.13.1             
setuptools                                         75.3.0             
sphinx                                         (!) 7.4.7              
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
sympy                                          (!) 1.13.1             
tifffile                                       (!) 2024.8.30          
tomli                                          (!) 2.0.2              
tqdm                                           (!) 4.66.6             
typer                                          (!) 0.12.5             
webcolors                                      (!) 24.8.0             
zarr                                               2.18.2             
zipp                                               3.20.2

Outdated dependencies after PR:

alabaster                                      (!) 0.7.16     1.0.0    
anndata                                            0.10.9     0.11.1   
astropy                                        (!) 6.0.1      6.1.6    
cellpose                                       (!) 2.2.3      3.1.0    
contourpy                                      (!) 1.3.0      1.3.1    
dask                                               2024.8.0   2024.11.2
docstring-parser                                   0.15       0.16     
executing                                      (!) 0.10.0     2.1.0    
filelock                                           3.13.4     3.16.1   
imageio-ffmpeg                                 (!) 0.4.9      0.5.1    
ipython                                        (!) 8.18.1     8.29.0   
lxml                                               4.9.4      5.3.0    
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.12   
napari-skimage-regionprops                     (!) 0.8.2      0.10.1   
networkx                                       (!) 3.2.1      3.4.2    
notebook                                       (!) 7.0.7      7.2.2    
numcodecs                                          0.12.1     0.14.0   
numpy                                              1.26.4     2.1.3    
nvidia-cublas-cu12                             (!) 12.4.5.8   12.6.3.3 
nvidia-cuda-cupti-cu12                         (!) 12.4.127   12.6.80  
nvidia-cuda-nvrtc-cu12                         (!) 12.4.127   12.6.77  
nvidia-cuda-runtime-cu12                       (!) 12.4.127   12.6.77  
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.5.1.17 
nvidia-cufft-cu12                              (!) 11.2.1.3   11.3.0.4 
nvidia-curand-cu12                             (!) 10.3.5.147 10.3.7.77
nvidia-cusolver-cu12                           (!) 11.6.1.9   11.7.1.2 
nvidia-cusparse-cu12                           (!) 12.3.1.170 12.5.4.2 
nvidia-nccl-cu12                               (!) 2.21.5     2.23.4   
nvidia-nvjitlink-cu12                          (!) 12.4.127   12.6.77  
nvidia-nvtx-cu12                               (!) 12.4.127   12.6.77  
pooch                                          (!) 1.8.0      1.8.2    
pydantic                                           2.8.2      2.9.2    
pydantic-core                                      2.20.1     2.27.0   
pytest                                         (!) 7.4.4      8.3.3    
scipy                                              1.13.1     1.14.1   
sphinx                                         (!) 7.4.7      8.1.3    
stack-data                                     (!) 0.5.1      0.6.3    
stackview                                      (!) 0.8.2      0.12.0   
sympy                                          (!) 1.13.1     1.13.3   
tifffile                                       (!) 2024.8.30  2024.9.20
zarr                                               2.18.2     2.18.3

Note: there may be dependencies in the table above which were not updated as part of this PR. The reason is they require manual updating due to the way they are pinned.

github-actions[bot] commented 1 week ago

Coverage report

This PR does not seem to contain any modification to coverable code.

tcompa commented 1 week ago

Closing, to simplify merging of #866