Open issue in vizarr about viewing wells - Githubissues

fractal-analytics-platform / fractal-vizarr-viewer

Prototype to explore serving/viewing zarr data

BSD 3-Clause "New" or "Revised" License

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Open issue in vizarr about viewing wells #24

Open tcompa opened 1 week ago

tcompa commented 1 week ago

We currently open ome-zarr images, and it works. When we go one level up (ome-zarr well), it does not work. We should reproduce this issue locally and identify where the problem comes from, and we should open the issue on vizarr once we are able to observe it on some publicly-available dataset.

jluethi commented 1 week ago

To have a concrete example (within the UZH network & with Fractal authentication): We can load https://fractal-bvc.mls.uzh.ch/vizarr/?source=https://fractal-bvc.mls.uzh.ch/vizarr/data/shares/prbvc.biovision.uzh/joel_testing/20240723_23_well_plate/20200812-CardiomyocyteDifferentiation14-Cycle1.zarr/B/09/0

But https://fractal-bvc.mls.uzh.ch/vizarr/?source=https://fractal-bvc.mls.uzh.ch/vizarr/data/shares/prbvc.biovision.uzh/joel_testing/20240723_23_well_plate/20200812-CardiomyocyteDifferentiation14-Cycle1.zarr/B/09 does not appear to load.