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fraenkel-lab / OmicsIntegrator

This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a network context.
http://fraenkel.mit.edu/omicsintegrator
BSD 2-Clause "Simplified" License
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Test depth #18

Closed aabaker99 closed 7 years ago

aabaker99 commented 7 years ago

I added some tests for the "D" depth parameter using the same test network used in the "w" tests (mostly for convenience).

agitter commented 7 years ago

Thanks! I'll leave this open for a few days in case anyone else wants to review the changes and then merge later this week.

agitter commented 7 years ago

Great tests. Testing for an error when D=0 is a good idea, and I didn't realize that the number of edges msgsteiner allows from root to leaf is < D not <= D.