i) added support for direct input of FASTQ/BAM files
ii) added pipeline function to run all the analysis steps sequentially
iii) added interface for the web app including the export of all data in a JSON format
iv) added support for Library KY 1.1
v) minor fixes in the error hangling, graphical parameters / options using withr pacakge
vi) updated seq functions
i) added support for direct input of FASTQ/BAM files ii) added pipeline function to run all the analysis steps sequentially iii) added interface for the web app including the export of all data in a JSON format iv) added support for Library KY 1.1 v) minor fixes in the error hangling, graphical parameters / options using withr pacakge vi) updated seq functions