Open flayner2 opened 2 years ago
Found two links that might help solving this issue:
Thank you, @flayner2 . Solved in latest commit in https://github.com/fcampelo/CALANGO (version 1.0.7). Please reinstall from that repo and test again.
@franciscolobo , I sent you PR #9 to sync that yo your repo.
Cheers, Felipe
Issue
When running CALANGO using either a Pfam or GO database to analyze a dataset, the package errors while generating the HTML report with the following message:
Tests
The issue doesn't happen when running KOMODO2 with exactly the same data and parameters, it only happens when I try to run CALANGO. It may be useful to have some sort of verbose error logging to a file inbuilt to help with bug reporting in the future.
Data
Those are the parameter used for testing with both KOMODO2 and CALANGO. All file paths specified in the parameters are relative paths. If you need access to the data, reach me in private.
GO
Pfam
Hit me up if you need any additional information.