bug: maxbinCross rule does not use multiple threads

franciscozorrilla / metaGEM

:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data

https://franciscozorrilla.github.io/metaGEM/

MIT License

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bug: maxbinCross rule does not use multiple threads #53

Closed franciscozorrilla closed 3 years ago

franciscozorrilla commented 3 years ago

Add -thread {config[cores][maxbin]} flag to maxbinCross rule in Snakefile (line 867):

run_MaxBin.pl -contig contigs.fasta -out $(basename $(dirname {output})) -abund_list abund.list