franciscozorrilla / metaGEM

:gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data
https://franciscozorrilla.github.io/metaGEM/
MIT License
203 stars 42 forks source link

Feat: use scaffolding information for binning #75

Closed franciscozorrilla closed 2 years ago

franciscozorrilla commented 3 years ago

Binnacle has a interesting and easy to add-on approach. This way we don't need to change any binners, Binnacle simply feeds them scaffold coverage info + scaffolds for binning.