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frankkramer-lab / MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
GNU General Public License v3.0
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Custom architecture #38

Closed covasquezv closed 4 years ago

covasquezv commented 4 years ago

Hi! according to the documentation it is possible to use a custom architecture using an abstract class. Since it is briefly mentioned and there's not much information about it, I would like to know if there's any tutorial/example to understand how to use it. I haven't been able to get it with what's currently available.

Thanks in advance!

muellerdo commented 4 years ago

Hey @covasquezv,

you are right. Sadly, there was not much documentation on custom architectures.

Therefore, I wrote a little tutorial Jupyter Notebook on how to integrate custom architectures into the MIScnn pipeline
and also updated the architecture page in the Wiki.

Check out this: https://github.com/frankkramer-lab/MIScnn/blob/master/tutorials/Custom_Architecture.ipynb

Hope that I was able to help you.

Cheers, Dominik

covasquezv commented 4 years ago

Great! The tutorial is very clear for me. Thanks a lot!

Best, Constanza