search

frankkramer-lab / MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
GNU General Public License v3.0
400 stars 116 forks source link

added simple CLI for Miscnn #75

Closed Deathlymad closed 3 years ago

Deathlymad commented 3 years ago

For data exploration and verification of the data directory.

codecov-commenter commented 3 years ago

Codecov Report

Merging #75 (5077812) into development (f364606) will decrease coverage by 7.04%. The diff coverage is 0.00%.

Impacted file tree graph

@@               Coverage Diff               @@
##           development      #75      +/-   ##
===============================================
- Coverage        91.57%   84.53%   -7.05%     
===============================================
  Files               52       53       +1     
  Lines             3705     4048     +343     
===============================================
+ Hits              3393     3422      +29     
- Misses             312      626     +314
Impacted Files Coverage Δ
miscnn/cli/__main__.py 0.00% <0.00%> (ø)
miscnn/evaluation/split_validation.py 88.46% <0.00%> (-2.02%) :arrow_down:
miscnn/evaluation/cross_validation.py 89.39% <0.00%> (-0.93%) :arrow_down:
miscnn/data_loading/interfaces/nifti_io.py 84.84% <0.00%> (-0.64%) :arrow_down:
miscnn/data_loading/interfaces/image_io.py 85.71% <0.00%> (-0.23%) :arrow_down:
tests/test_subfunctions.py 99.71% <0.00%> (+0.01%) :arrow_up:
miscnn/processing/preprocessor.py 90.22% <0.00%> (+0.05%) :arrow_up:
miscnn/neural_network/model.py 96.70% <0.00%> (+1.09%) :arrow_up:

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update f364606...5077812. Read the comment docs.