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frankkramer-lab / MIScnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
GNU General Public License v3.0
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using MISCNN in BRATS #88

Open bhralzz opened 3 years ago

bhralzz commented 3 years ago

Hi,

is there any sample code such as kits19 for brats2020 ? actually if there is such a code, it can be a good backbone for huge number of modifications! please supply that if possible (at least how it can be used for reading brats data!) Thanks

muellerdo commented 3 years ago

Hello @bhralzz,

a student in our lab is currently working on a JupyterNotebook example for BRATS19 for his bachelor thesis. I am planing to upload it to the GitHub repository after the marking process, so probably in a few weeks.

But right now, we don't offer any BRATS example application. However, you are welcome to contribute if you want to create one for BRATS20! :)

Cheers, Dominik

PS: Please do not open up an issue and simultaneously an email to me, due to this will lead to a larger overhead in terms of response time.

marcmorcos commented 2 years ago

That's great. The notebooks are great starting points for using the library. Looking forward to it.

muellerdo commented 2 years ago

Check out this: