Refactor: commented out ViT-related mentions in files

frankkramer-lab / aucmedi

a framework for Automated Classification of Medical Images

https://frankkramer-lab.github.io/aucmedi/

GNU General Public License v3.0

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Refactor: commented out ViT-related mentions in files #223

Closed rizoudal closed 1 month ago

rizoudal commented 1 month ago

This pull request addresses issue #220.

Changes made:

Commented out all ViT-related mentions in files.
Commented out ViT-related unittests.
Removed vit-keras dependency from requirements.txt.

Files modified:

README.md
aucmedi/neural_network/architectures/image/__init__.py
requirements.txt
setup.py
tests/test_architectures_image.py

Please review the changes and let me know if there are any questions or further adjustments needed.

muellerdo commented 1 month ago

Nice PR, thanks!

Two more things: 1) Replace tensorflow addons with direct tensorflow imports -> F1 in AutoML scripts: from tensorflow_addons.metrics import F1Score 2) There is a IndentationError in the unittesting for image architectures:

E     File "/home/runner/work/aucmedi/aucmedi/tests/test_architectures_image.py", line 749
E       def test_ConvNeXtBase(self):
E   IndentationError: unexpected indent

BR DM

muellerdo commented 1 month ago

Nice! Requirements are running through :) Merging to dev, great work! Thank you.