frankyeh / DSI-Studio

A Tractography Tool for Diffusion MRI
http://dsi-studio.labsolver.org
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Mark tracts on T1W with colors #75

Closed Shade- closed 1 year ago

Shade- commented 1 year ago

Hello, thank you for this amazing piece of software. Makes tractography so much easier. I have succeeded creating my tract and I've used the [Slices] > [Mark tracts on slices] feature to print the tract on my T1w and export it as DICOM. This allows me to load my tracks on the StealthStation S7 we are using in the OR, with awesome results.

My question is, can we mark tracts with different colors so we can distinguish them onto T1w? Thank you!

frankyeh commented 1 year ago

The raw T1w DICOM is grayscale. The navigation software may have a way to color. Frank

On Tue, Jan 10, 2023, 3:15 AM Filippo @.***> wrote:

Hello, thank you for this amazing piece of software. Makes tractography so much easier. I have succeeded creating my tract and I've used the [Slices] > [Mark tracts on slices] feature to print the tract on my T1w and export it as DICOM. This allows me to load my tracks on the StealthStation S7 we are using in the OR, with awesome results.

My question is, can we mark tracts with different colors so we can distinguish them onto T1w? Thank you!

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Shade- commented 1 year ago

Thanks! I was able to play with the threshold on the navigation system and got a nice colored 3D model of my tract.