Would be nice to have the extra flexibility for users to provide their own set of transcripts. The act of comparing one set of transcripts to another is quite general and there may be use cases where reference set is not all annotated transcripts but already curated.
Alternatively, could also add options to specify the filtering column and key values. And toggle filtering on/off with an additional option. Maybe too complicated though.
Would be nice to have the extra flexibility for users to provide their own set of transcripts. The act of comparing one set of transcripts to another is quite general and there may be use cases where reference set is not all annotated transcripts but already curated.
Alternatively, could also add options to specify the filtering column and key values. And toggle filtering on/off with an additional option. Maybe too complicated though.
related to #2