Currently the type of event e.g. 'spliced last exon', 'bleedthrough last exon' or 'last exon extension' are only defined for novel events (in get_novel_last_exons.py). Annotated events could fall under the spliced last exon or bleedthrough last exon category, but are not annotated as such. This becomes a little annoying when looking at a list of differential events, because it would be useful to know how many of each type you are getting.
this shouldn't be too tricky as would be re-using functions from get_novel_last_exons.py
SamBryce-Smith
commented
1 year ago
Currently the type of event e.g. 'spliced last exon', 'bleedthrough last exon' or 'last exon extension' are only defined for novel events (in get_novel_last_exons.py). Annotated events could fall under the spliced last exon or bleedthrough last exon category, but are not annotated as such. This becomes a little annoying when looking at a list of differential events, because it would be useful to know how many of each type you are getting.
this shouldn't be too tricky as would be re-using functions from get_novel_last_exons.py