frattalab / PAPA

PAPA (Pipeline-Alternative Polyadenylation) - Snakemake pipeline for analysis of APA from short-read RNA-seq data
GNU General Public License v3.0
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sge profile not working for UCL SGE cluster #4

Open SamBryce-Smith opened 3 years ago

SamBryce-Smith commented 3 years ago

I think because the profile lacks some default options that UCL SGE cluster requires, and also tries to set a tmpdir which UCL CS cluster forbids.

Need to experiment/make custom profile for UCL CS SGE cluster.