PAPA (Pipeline-Alternative Polyadenylation) - Snakemake pipeline for analysis of APA from short-read RNA-seq data
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get_combined_quant_gtf.py - _ref suffix coordinates are for matching introns, should probably be removed #41
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SamBryce-Smith opened 1 year ago
Noisy attributes remain in the GTF especially for reference events. Could probably do away with these annotations entirely