PAPA (Pipeline-Alternative Polyadenylation) - Snakemake pipeline for analysis of APA from short-read RNA-seq data
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get_combined_quant_gtf - retain matching reference transcript ID from novel GTF #49
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SamBryce-Smith opened 1 year ago
https://github.com/frattalab/PAPA/blob/aa034556b3bb96448eb58044b7414e34f2a42862/scripts/get_combined_quant_gtf.py#LL663C1-L663C1
Makes downstream analysis with last exons only an incredible pain in the behind...