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frederikkemarin
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BEND
Benchmarking DNA Language Models on Biologically Meaningful Tasks
BSD 3-Clause "New" or "Revised" License
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Add DNABert2Embedder
#17
fteufel
closed
1 year ago
1
Run Enhancer Annotation task with new embedder
#16
frederikkemarin
closed
1 year ago
0
Run gene finding task with new embedder
#15
frederikkemarin
closed
1 year ago
0
Add DNABERT-2
#14
fteufel
closed
1 year ago
2
Add HyenaDNAEmbedder
#13
fteufel
closed
1 year ago
0
add `remove_cls_token` flag.
#12
fteufel
closed
1 year ago
1
Bend dev
#11
fteufel
closed
1 year ago
0
prettify readme
#10
fteufel
closed
1 year ago
0
Variant effects example
#9
fteufel
closed
1 year ago
0
Frederikke
#8
frederikkemarin
closed
1 year ago
0
Feature/embedding io
#7
mhorlacher
closed
1 year ago
0
Necessary changes to make previous variant effects script work as intended
#6
fteufel
closed
1 year ago
0
basic setup.py for `pip install -e .`
#5
fteufel
closed
1 year ago
0
Bend dev
#4
fteufel
closed
1 year ago
0
more todos and readme
#3
fteufel
closed
1 year ago
0
More unfinished code to guide repo structure
#2
fteufel
closed
1 year ago
0
Uploaded models + embedders
#1
fteufel
closed
1 year ago
0
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