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freeseek / mocha

MOsaic CHromosomal Alterations (MoChA) caller
MIT License
81 stars 23 forks source link

FreeBSD port available #20

Closed outpaddling closed 1 year ago

outpaddling commented 2 years ago

FYI:

bio-mocha has been committed to the FreeBSD ports collection. It might be helpful to users if you could post a message like the following on your website:

Thanks!

bio-mocha can be installed on FreeBSD via the FreeBSD ports system.

To install via the binary package, simply run:

pkg install bio-mocha

This will very quickly install a prebuilt binary using only highly-portable optimizations, much like apt, yum, etc.

FreeBSD ports can just as easily be built and installed from source, although it will take longer (for the computer, not for you):

cd /usr/ports/biology/bio-mocha
make install

Building from source allows installing to a different prefix, compiling with native optimizations, and in some cases, building with non-default options such as different compilers or dependencies. For example, adding

CFLAGS+=-march=native

to /etc/make.conf will cause ports built from source to use all native optimizations known to the compiler for the local CPU, resulting in faster but less portable binaries.

To report issues with a FreeBSD port, please submit a PR at:

https://www.freebsd.org/support/bugreports.html

For more information, visit https://www.freebsd.org/ports/index.html.

outpaddling commented 1 year ago

I'm not seeing anything on Github at this time. Did you not push the changes yet? Thanks...