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fridells51 / qbb2023-answers

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Week 9 Feedback #9

Open dtaylo95 opened 10 months ago

dtaylo95 commented 10 months ago

Python script to run DE analysis

6/6

Exercise Points Possible Grade
Implementation of manual DE test 1 1
Manual DE test on all genes 1 1
Code to do FDR correction 1 1
Running PyDESeq2 on all genes 1 1
Overlap between methods 1 1
Code to produce volcano plot 1 1

README.md with answers to questions

1/1

Exercise Points Possible Grade
Jaccard index overlap between methods 1 1

Output text files

2/2

Exercise Points Possible Grade
List of DE genes in manual test 1 1
List of DE genes in PyDESeq2 test 1 1

Pretty plots

1/1

Exercise Points Possible Grade
Exercise 2 Volcano plot 1 1

Grade

Total: 10/10

Great work!