My strategy for #40 was to add the option to read a CSV where each row is a CloneID to be ignored. The is_similar function will be used to compare CloneIDs detected with the ones in the blacklist (with a maximum Hamming distance of 0 in order to also remove the ones missing bases).
My strategy for #40 was to add the option to read a CSV where each row is a CloneID to be ignored. The is_similar function will be used to compare CloneIDs detected with the ones in the blacklist (with a maximum Hamming distance of 0 in order to also remove the ones missing bases).