frisen-lab / TREX

Simultaneous lineage TRacking and EXpression profiling of single cells using RNA-seq
MIT License
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Convert test.sh tests to pytest tests #57

Closed marcelm closed 11 months ago

marcelm commented 11 months ago

This is a first step towards fully eliminating the test.sh shell script. pytest is a nice testing framework with many helpful features that we don’t get in the shell script. For example:

The code is a bit longer, but it’s worth it to me.