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fslaborg / fslaborg.github.io

The fslab website
https://fslab.org
MIT License
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Add tutorial: correlation network #35

Closed HLWeil closed 2 years ago

HLWeil commented 2 years ago

Summary

In this tutorial, a simple workflow will be presented for how to create and visualize a correlation network from experimental gene expression data. For this, 4 FsLab libraries will be used:

  1. FSharp.Data for retreiving the data file
  2. Deedle for reading a frame containing the data
  3. & 3. FSharp.Stats to calculate correlations and finding a critical threshold
  4. CyJS.NET to visualize the results