RuntimeError: Error building extension 'sparse_dot'

[yao143]

hi, I get this error, who can help me ? thanks!!!

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(pytorch1.2) C:\Users\13\Desktop\RGM\RGM>python eval.py --cfg experiments/test_RGM_Seen_Jitter_shapenet_transformer.yaml Traceback (most recent call last): File "C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\utils\cpp_extension.py", line 960, in _build_extension_module check=True) File "C:\Anaconda\envs\pytorch1.2\lib\subprocess.py", line 438, in run output=stdout, stderr=stderr) subprocess.CalledProcessError: Command '['ninja', '-v']' returned non-zero exit status 1.

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "eval.py", line 13, in from parallel import DataParallel File "C:\Users\13\Desktop\RGM\RGM\parallel__init__.py", line 1, in from .data_parallel import * File "C:\Users\13\Desktop\RGM\RGM\parallel\data_parallel.py", line 7, in from .scatter_gather import scatter_kwargs, gather File "C:\Users\13\Desktop\RGM\RGM\parallel\scatter_gather.py", line 3, in from sparse_torch import CSRMatrix3d, CSCMatrix3d, concatenate File "C:\Users\13\Desktop\RGM\RGM\sparse_torch__init__.py", line 5, in from .csx_matrix import CSRMatrix3d, CSCMatrix3d, dot, concatenate File "C:\Users\13\Desktop\RGM\RGM\sparse_torch\csx_matrix.py", line 13, in '/usr/include/python{}.{}/'.format(sys.version_info.major, sys.version_info.minor)] File "C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\utils\cpp_extension.py", line 658, in load is_python_module) File "C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\utils\cpp_extension.py", line 827, in _jit_compile with_cuda=with_cuda) File "C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\utils\cpp_extension.py", line 880, in _write_ninja_file_and_build _build_extension_module(name, build_directory, verbose) File "C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\utils\cpp_extension.py", line 973, in _build_extension_module raise RuntimeError(message) RuntimeError: Error building extension 'sparse_dot': [1/2] cl /showIncludes -DTORCH_EXTENSION_NAME=sparse_dot -DTORCH_API_INCLUDE_EXTENSION_H -IC:\usr\include\python3.6 -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\TH -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\THC "-IC:\Program Files\NVIDIA GPU Computing Toolkit\CUDAv10.0\include" -IC:\Anaconda\envs\pytorch1.2\Include -D_GLIBCXX_USE_CXX11_ABI=0 /MD /wd4819 /EHsc -c C:\Users\13\Desktop\RGM\RGM\extension\sparse_dot\sparse_dot.cpp /Fosparse_dot.o FAILED: sparse_dot.o cl /showIncludes -DTORCH_EXTENSION_NAME=sparse_dot -DTORCH_API_INCLUDE_EXTENSION_H -IC:\usr\include\python3.6 -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\TH -IC:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\THC "-IC:\Program Files\NVIDIA GPU Computing Toolkit\CUDAv10.0\include" -IC:\Anaconda\envs\pytorch1.2\Include -D_GLIBCXX_USE_CXX11_ABI=0 /MD /wd4819 /EHsc -c C:\Users\13\Desktop\RGM\RGM\extension\sparse_dot\sparse_dot.cpp /Fosparse_dot.o 用于 x64 的 Microsoft (R) C/C++ 优化编译器 19.16.27045 版 版权所有(C) Microsoft Corporation。保留所有权利。

注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include\torch/torch.h 注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include\torch/all.h 注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include\torch/cuda.h 注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch/csrc/WindowsTorchApiMacro.h 注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\c10/macros/Export.h 注意: 包含文件: C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\c10/macros/cmake_macros.h C:\Anaconda\envs\pytorch1.2\lib\site-packages\torch\include\torch\csrc\api\include\torch/cuda.h(5): fatal error C1083: 无法打开包括文件: “cstddef”: No such file or directory ninja: build stopped: subcommand failed.

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Prompt me "Error building extension'sparse_dot'"

[ZhileiChen99]

Do you have more than one GPUs? If you have only one GPU, you can try to remove all codes with respect to DataParallel.

[yao143]

Yes, I only have one GPU. Can you talk in more detail? Thank you very much

[ZhileiChen99]

You can first try to delete "from parallel import DataParallel", and then delete any codes with respect to this code. I am not sure this will work. Good luck.

[yao143]

Thank you very much! ! ! I tried it before you answered, and I can get the evaluation result.