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fulcrumgenomics / fgbio

Tools for working with genomic and high throughput sequencing data.
http://fulcrumgenomics.github.io/fgbio/
MIT License
309 stars 67 forks source link

feat: SequenceMetadata can have name and length looked up by key #1002

Closed nh13 closed 1 month ago

nh13 commented 1 month ago

They will return strings for those values!

codecov[bot] commented 1 month ago

Codecov Report

Attention: Patch coverage is 90.00000% with 1 line in your changes missing coverage. Please review.

Project coverage is 95.62%. Comparing base (c4e4bb6) to head (843a7fa).

Files Patch % Lines
...com/fulcrumgenomics/fasta/SequenceDictionary.scala 90.00% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #1002 +/- ## ======================================= Coverage 95.62% 95.62% ======================================= Files 126 126 Lines 7378 7382 +4 Branches 490 497 +7 ======================================= + Hits 7055 7059 +4 Misses 323 323 ``` | [Flag](https://app.codecov.io/gh/fulcrumgenomics/fgbio/pull/1002/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=fulcrumgenomics) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/fulcrumgenomics/fgbio/pull/1002/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=fulcrumgenomics) | `95.62% <90.00%> (+<0.01%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=fulcrumgenomics#carryforward-flags-in-the-pull-request-comment) to find out more.

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