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fulcrumgenomics / fgsv

Tools to gather evidence for structural variation via breakpoint detection.
MIT License
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Cannot get mate end position on read without a mapped mate. #16

Closed nh13 closed 2 years ago

nh13 commented 2 years ago

This can happen if we have one end map and the other one not.

Exception in thread "main" java.lang.IllegalArgumentException: requirement failed: Cannot get mate end position on read without a mapped mate.
nh13 commented 2 years ago

Fixed in #17