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fulcrumgenomics / fqgrep

Grep for FASTQ files
MIT License
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Support zst compressed fastq #20

Open yesimon opened 1 year ago

yesimon commented 1 year ago

Feature request to support zstandard compressed fastq e.g. .fastq.zst. Its compression performance is much better than gzip.

nh13 commented 1 year ago

As input or output, or both? For example, here is where we read in the FASTQs where you could plug this in. Pull requests or sponsorship welcome!