Open XscapeCn opened 3 years ago
Apologies, compiler moved on but the code didn't. Just pushed change that will allow it to compile if you pull master
Thank you But I got another wrong
cc -c -o src/interpolate.o src/interpolate.c
/data1/home/songxu/software/ldc2-1.24.0-linux-x86_64/bin/ldc2 -Jviews -d-debug -g -unittest -w src/arg_parse.d src/run_analysis.d src/correct.d src/best.d src/weights.d src/calculation.d src/main.d src/read_data.d src/interpolate.o -ofunittest
src/interpolate.o:interpolate.c:function interpolate: error: undefined reference to 'gsl_interp_steffen'
src/interpolate.o:interpolate.c:function interpolateSingleValue: error: undefined reference to 'gsl_interp_steffen'
collect2: error: ld returned 1 exit status
Error: /usr/bin/cc failed with status: 1
make: *** [test] Error 1
this means your version of the gsl is too old. Steffen interpolation was introduced in version 2.1. You can check your version with gsl --version
sorry, that should be gsl-config --version
Thank you, I have already updated my gsl to 2.6, gsl-config --version is 2.6. And I compiled it in another PC, but when read .vcf.gz, it will send an error:
Failed to read phenotype IDs. invalid UTF-8sequence.
Thank you again!
I'm sorry to bother you, but I still get the following error after repeated attempts.
Environments: ldc: 2-1.24.0 dmd: 2.094.2 gsl: 2.6
/data1/home/songxu/software/ldc2-1.24.0-linux-x86_64/bin/ldc2 -Jviews -d-debug -g -unittest -w src/arg_parse.d src/run_analysis.d src/correct.d src/best.d src/weights.d src/calculation.d src/main.d src/read_data.d src/interpolate.o -ofunittest src/run_analysis.d(3): Error: module calculation member Opts is not visible from module run_analysis make: *** [test] Error 1
Please advice.