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furrer-lab / r-containers

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Workflow for container development #43

Open j-i-l opened 1 week ago

j-i-l commented 1 week ago

We are missing a development pipeline that allows us to run checks before merging.

          > Looks OK, I think.

I'm used to define env variables in a docker with

ENV PACKAGE_NAME=... but I do not see why running a classical declaration (i.e. RUN PACKAGE_NAME=...) should not work as well.

https://github.com/furrer-lab/r-containers/actions/runs/9663922149/job/26657338485#step:6:36217

it wasn't OK it seems :see_no_evil:

We should add a dev pipeline that builds the containers on pull requests... I'll add this!

Originally posted by @j-i-l in https://github.com/furrer-lab/r-containers/issues/39#issuecomment-2189720024