furrer-lab / r-containers

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3 container to run abn test #5

Closed j-i-l closed 6 months ago

j-i-l commented 6 months ago

For now building the docker needs the FLAVOUR argument to be set, so:

docker build --build-arg FLAVOUR=R-devel -t abn/abn-debian-clang-devel .
j-i-l commented 6 months ago

Since building the docker runs on tag, see https://github.com/furrer-lab/r-containers/actions/runs/7292119173/job/19872462520 for the status.

j-i-l commented 6 months ago

https://github.com/furrer-lab/r-containers/actions/runs/7292219175/job/19872758093#step:5:2418

j-i-l commented 6 months ago

From https://github.com/furrer-lab/devel-abn/pull/79#issuecomment-1866847487 we get what is to add to this docker:

j-i-l commented 6 months ago

Going to add INLA with dependency fmesher, since https://github.com/furrer-lab/devel-abn/pull/79#discussion_r1434550972

j-i-l commented 6 months ago

This will also address #6

j-i-l commented 6 months ago

For now the abn specific configuration will be implemented in a single Dockerfile. A refactoring to a setup using docker compose will be considered in a 2nd step.