I have suggestions for the formatting of the spec file:
using a consistent style for descriptions; I recommend always to use the multi-line format (with the sole exception of single word comments).
Use Markdown style to structure multi-line descriptions:
start:
description: |
Precise or fuzzy start coordinate position(s), allele locus (0-based, inclusive).
* start only:
- for single positions, e.g. the start of a specified sequence
alteration where the size is given through the specified
alternateBases
* `start` and `end`:
...
follow the Google code documentation style & break lines in comments at 80 chars
I have suggestions for the formatting of the spec file: