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ga4gh / fasp-scripts

Apache License 2.0
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Rename classes to reflect Discovery Search name change to Data Connect #32

Closed ianfore closed 3 years ago

ianfore commented 3 years ago

The main change is expected to be to the DiscoverySearchClient which will be renamed DataConnectClient.

The fasp.search sub-package will retain its current name. It's siblings are named fast.loc and fasp.workflow and roughly correspond to DRS and WES/TES functions respectively. However, the packages include equivalent functionality from other sources and are named to reflect the functionality covered rather than the specific GA4GH specification used.

ianfore commented 3 years ago

Created branch from master for rename work Renamed DiscoverySearchClient as above Renamed the module to data_connect_client.py Updated scripts and notebooks to use new names Made some changes to README's and notebooks which refer to search

Still to do. Comprehensive review for references to Search in text of notebooks, README's etc.