ga4gh / pedigree_family_history_terminology

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Create kin-to-fhir-FamilyMember.sssom.csv #44

Closed cmungall closed 2 months ago

cmungall commented 5 months ago

Note: Claude.ai made this, it's intended as a first pass, I did not validate

prompt:

Align KIN with this FHIR value set. Results should be in SSSOM like CSV: subject_id (KIN ID) subject_label (KIN label) predicate_id (skos predicate - eg exactMatch, closeMatch) object_id (FHIR CODE) object_label (FHIR display name)

use the definitions and your judgment. FHIR is role based from view of subject, so FHIR CHILD code is the same as child_of, NOT has_child.

Avoid duplicate entries, try and give the best match

https://claude.ai/chat/a2f2a4b2-6746-439c-b066-e05d26830f3b

Fixes #43