Closed MuhammedHasan closed 5 years ago
Check that gtf, fasta, and vcf file have consistent chromosome naming convention. For example, '1' in vcf don't overlap with 'chr1' in gtf and leads to cryptic error.
Check that gtf, fasta, and vcf file have consistent chromosome naming convention. For example, '1' in vcf don't overlap with 'chr1' in gtf and leads to cryptic error.