Breaks with latest versions of kipoiseq

gagneurlab / MMSplice_MTSplice

Tissue-specific variant effect predictions on splicing

MIT License

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Closed aerval closed 4 years ago

aerval commented 4 years ago

I assume you are aware of it as you are developing both in parallel, but with the current release of kipoiseq mmsplice is unable to run

Quickfix: dependency kipoiseq==0.2.5 (haven't checked which one breaks exactly) alternative: adjust vcf_dataloader.py L78 ff.

MuhammedHasan commented 4 years ago

Thanks for reporting the issue.