search

gagneurlab / absplice

33 stars 4 forks source link

Update environment_spliceai_rocksdb.yaml to fix numpy bug #40

Open KuechlerO opened 5 months ago

KuechlerO commented 5 months ago

This simple adjustment of the conda env config that fixes the numpy version should fix the bug described in https://github.com/gagneurlab/absplice/issues/39.

neverov-am commented 1 month ago

Hi @KuechlerO ,

Thanks again for the fix, we really appreciate it. We tested your version, but probably due to our particular setup it raised a conflict with TensorFlow. So we wanted to make sure that it works for all users and fixed its version as well. Also, we now separately install Numpy after the spliceai-rocksdb package, as the setup of the latter seems to override the Numpy version that was already installed.

Best, Aleksandr