Strand specific counting wrt samples in FRASER

gagneurlab / drop

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

MIT License

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Closed vyepez88 closed 1 month ago

vyepez88 commented 1 month ago

Counting is done using the strand of each sample instead of the strand of whole cohort in FRASER
FRASER result no longer contains sample annotation info
Sample annotation file now should always contain STRAND for all samples, this is also updated in demo sample annotation file