galaxy-genome-annotation / docker-tripal

Docker container for Tripal
10 stars 11 forks source link

Some warnings on Elasticsearch may need some attention? #40

Closed RichardBruskiewich closed 5 years ago

RichardBruskiewich commented 5 years ago

elasticsearch_1 | OpenJDK 64-Bit Server VM warning: Option UseConcMarkSweepGC was deprecated in version 9.0 and will likely be removed in a future release.

elasticsearch_1 | [2019-02-22T05:16:22,452][WARN ][o.e.c.l.LogConfigurator ] [unknown] Some logging configurations have %marker but don't have %node_name. We will automatically add %node_name to the pattern to ease the migration for users who customize log4j2.properties but will stop this behavior in 7.0. You should manually replace %node_name with [%node_name]%marker in these locations:

elasticsearch_1 | /usr/share/elasticsearch/config/log4j2.properties

abretaud commented 5 years ago

You're using something like this: https://github.com/galaxy-genome-annotation/docker-tripal/blob/master/docker-compose.yml#L35 ? I guess this should be checked with the authors of the elasticsearch docker image. The first thing to do would be to check with an up-to-date docker image though