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galaxy-iuc / parsec

Access Galaxy at the speed of light with automatically generated BioBlend wrappers
Apache License 2.0
9 stars 9 forks source link

1.0.0 Release #10

Closed hexylena closed 7 years ago

hexylena commented 7 years ago

TODO before release:

Missing Parameters

E.g. parsec history update_history was missing numerous params that are documented in help but are not in the argspec.

These are now fixed and function.

JSON Inputs

Previously json inputs did not function. Now they do. Additionally loading from stdin, file, or raw string is supported. E.g. all of these will function the same:

cat params.json | parsec jobs search_jobs -; # Stdin
parsec jobs search_jobs params.json; # Filename
parsec jobs search_jobs $(cat params.json); # String argument

Better Example

I've added an example where I create a history, run a tool, and the launch a workflow and check its status in the terminal.

Shinier Docs

CLI Simplification

moved commands into subcommands. No longer do you get this gigantic list of a thousand things you can do, instead just:

utvalg_069

and then the subcommands are further refined:

utvalg_070

hexylena commented 7 years ago

@bgruening @mvdbeek both of you have used this yes? I don't suppose either of you would mind testing it out before I release?

bgruening commented 7 years ago

I can test this, for sure! How much time to I have? :)

hexylena commented 7 years ago

Hmm, I had not picked a date. Probably I will merge this next week, just want it to be in the release notes and maybe get some publicity.

hexylena commented 7 years ago

Almost ready to release. Thanks @nsoranzo for the bioblend release. @bgruening any concerns after your recent test? Anyone else in IUC want to try it out? It is starting to be a very nice toolkit

hexylena commented 7 years ago

@bgruening https://github.com/galaxy-iuc/parsec/blob/dev/docs/cookbook.rst#capturing-execution-state-as-xunit-output

bgruening commented 7 years ago

@erasche release!!! This is an amazing project! Let's get it out!