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galaxycomputationalchemistry
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galaxy-tools-compchem
:mega: Galaxy Tools for Computational Chemistry
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Missing tools
#89
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simonbray
opened
3 years ago
simonbray
commented
3 years ago
MDFP (
https://pubs.acs.org/doi/10.1021/acs.jcim.6b00778
), a package for extracting features from molecular dynamics trajectories, which can be used for machine learning applications.
LigGrep (
https://jcheminf.biomedcentral.com/articles/10.1186/s13321-020-00471-2
), a tool for filtering protein-ligand docking output by presence/absence of particular chemical interactions.
chrisbarnettster
commented
3 years ago
Lightdock or any open source protein-protein docking tools (
https://lightdock.org/tutorials/
)
https://github.com/bgruening/galaxytools/issues/1123
dpocket / mdpocket