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galaxyecology / tools-ecology

Galaxy Tools maintained and developed by the GalaxyE community
MIT License
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Copernicus marine data retrieving tool #126

Open Marie59 opened 1 week ago

Marie59 commented 1 week ago

Hi @bgruening and @yvanlebras !!

I just finished trying out this new tool to directly retrieve data from the Copernicus Marine Data Store (that goes along @annefou works on atmosphere and climate stores)

I tested it with my own credentials it works fine. Now, I don't know how to test it by setting up the credentials in the user > preferences > manage information part through planemo.

I tried to reuse both Anne's work and the work that was done on another copernicus marine tool medenv (I am not sure if the configfile part is necessary here I kept it from the medenv tool)

Let me know what you think of it !! Thanks

Marie59 commented 1 week ago

Oh it went wrong really quickly .... It's an issue with the .shed.yml ?

Marie59 commented 1 week ago
  • should this tool be in its own folder?

I don't think so. This all ocean tools.

Marie59 commented 1 week ago

Hello hello @bgruening ! Is this how you saw the tool ? I have 2 lint issue due to error messages supposedly too long for the lint could I skip them ?

I also did the test thing like you told me. Is this good ?

Marie59 commented 5 days ago

@bgruening Is this good now ? I could not test with username and password like the last commit with planemo. Is there a way to test it ? or we feel confident ?