Log stderr of a data manager job failing.

galaxyproject / ephemeris

Library for managing Galaxy plugins - tools, index data, and workflows.

https://ephemeris.readthedocs.org/

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Log stderr of a data manager job failing. #108

Closed rhpvorderman closed 5 years ago

rhpvorderman commented 5 years ago

Added the code to log a stderr when a data manager job is failing.

I also ported run-data-managers to the new pytest framework. So this extra logging stuff is also tested.

This should fix #107 .

rhpvorderman commented 5 years ago

I have changed the image as the bgruening/galaxy-stable:dev was giving problems. bgruening/galaxy-stable:latest seems to be a better choice.

rhpvorderman commented 5 years ago

So much clutter. And travis is giving issues with the environment. Furthermore codacy integration has been updated. I will close this and reopen in a new request.