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Galaxy Community Hub
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Link to galaxy tool dependencies is dead #238

Open infB opened 7 years ago

infB commented 7 years ago

There are some links all pointing to the ToolDependencies, which are dead.

  1. Dead link: Location: https://github.com/galaxyproject/galaxy/ File: README.rst The provided link is: https://wiki.galaxyproject.org/Admin/Tools/ToolDependencies

  2. Dead link: Location: https://galaxyproject.org/admin/config/tool-dependencies/ The provided link is: https://wiki.galaxyproject.org/Admin/Tools/ToolDependencies

pjbriggs commented 7 years ago

+1 I've just encountered this broken link too (I'm trying to find if there is a recommended version of samtools to install).

bgruening commented 7 years ago

@pjbriggs samtools < 1.0.

pjbriggs commented 7 years ago

Thanks @bgruening

mvdbeek commented 7 years ago

No, please install the latest samtools. Galaxy can deal with both, but old samtools will fall flat on the nose for long reads.

martenson commented 7 years ago

This is related to the faulty conversion from old wiki when we hit surge protection while scrapping.

At least 16 pages are still missing.

https://github.com/galaxyproject/galaxy-hub/search?utf8=%E2%9C%93&q=Surge+protection&type=

stephen-kolmann commented 6 years ago

I just experienced this issue too. I was on the admin Get Galaxy page, I clicked a link to send me to the Tool Dependencies page, but the link is incorrect. The correct tool dependencies URL is https://galaxyproject.org/admin/config/tool-dependencies/.

martenson commented 6 years ago

@stephen-kolmann should be fixed by https://github.com/galaxyproject/galaxy-hub/commit/fac7ecb5ea27046fe830afda65d16614aa5cb742