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Python 3.11-14 deprecations #16854

Open nsoranzo opened 1 year ago

nsoranzo commented 1 year ago

List of deprecated stuff we are currently using:

Others we may be using:

More are listed at https://docs.python.org/3/whatsnew/3.11.html#deprecated , https://docs.python.org/3/whatsnew/3.12.html#deprecated , https://docs.python.org/3.13/whatsnew/3.13.html#removed-modules-and-apis and https://docs.python.org/3.13/whatsnew/3.13.html#new-deprecations

cat-bro commented 1 year ago

The version of tensorflow in optional dependencies is too low to be compatible with python 3.11

nsoranzo commented 8 months ago

@cat-bro This is now tracked separately at https://github.com/galaxyproject/galaxy/issues/17857 .

elichad commented 4 days ago

For Python 3.12 you may already need to apt install python3-lib2to3 depending on your distribution. I'm using 3.12 from the deadsnakes PPA and needed this step