Open tnabtaf opened 8 years ago
Mmmh, this works for me both on usegalaxy.org and my local instance and on both txt and tabular datasets. Can you share a history or the affected dataset(s)?
Nicola, I've figured out what's going on, and it doesn't have anything to do with the Remove beginning of file command. I'm not sure if this is a bug, but it definitely is not a feature.
Take a look at https://usegalaxy.org/u/tnabtaf/h/removing-5-blank-lines. The uploaded Analysis (9).txt
and Analysis (10).txt
files were exported from the enrichment tool on the Gene Ontology home page. These files have 3 sections:
I erroneously assumed that the Remove beginning tool was not removing the lines because of
Analysis (9) has a datatype of txt, the default guess if you don't specify datatype in the upload form. Analysis (10) has a datatype of tabular. This datatype was manually assigned.
My confusion is because
I suggest:
I'm submitting a pull request for this issue... hopefully my changes will resolve the problem.
Thank you @sszakony !
Hi All,
The Remove beginning of a file tool (
galaxy/tools/filters/remove_beginning.xml
) isn't removing any lines. I tested this on a current cloud instance and on test with plain text files and tab delimited.