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The future of the phylogenetic tools? #2963

Open bgruening opened 8 years ago

bgruening commented 8 years ago

During our latest workshop I got the quesiton if we can make this add_scores compatible with HG38.

This raises a general question, do we want to support these tools here, do they need to be migrated? And why is this included? https://github.com/galaxyproject/galaxy/blob/dev/tools/evolution/add_scores.xml#L37

bgruening commented 8 years ago

Same for this tool: https://github.com/galaxyproject/galaxy/blob/c093c793b7ba589c41e7df3041585922ddc840d8/tools/phenotype_association/sift.xml#L91

jennaj commented 7 years ago

SIFT is failing even with hg18/hg19 as input. I won't make a ticket unless we plan to keep it around on the public servers.

example error (fails immediately):

Can't access SIFT output file "/galaxy-repl/main/jobdir/X/X/X/working/X/X_predictions.tsv"