Upload of gzipped gff3 files fail

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Upload of gzipped gff3 files fail #9732

Closed lparsons closed 4 years ago

lparsons commented 4 years ago

Uploading or importing via URL a gff3 files fails. The logs show the following error:

UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte

Example file c_elegans.PRJNA275000.WS276.annotations.gff3.gz - ftp://ftp.wormbase.org/pub/wormbase/releases/current-production-release/species/c_elegans/PRJNA275000/c_elegans.PRJNA275000.WS276.annotations.gff3.gz

lparsons commented 4 years ago

Being addressed in #9731

mvdbeek commented 4 years ago

Should be fixed by https://github.com/galaxyproject/galaxy/pull/9731, thanks for the report @lparsons (and @jennaj).