add desktop link for komodo; drop atom and its mentions

galaxyproject / planemo-machine

A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.

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add desktop link for komodo; drop atom and its mentions #81

Closed martenson closed 8 years ago

jmchilton commented 8 years ago

@martenson Atom was broken because $HOME/.config was not writable by the ubuntu. I believe I have fixed this - but I haven't tested it. I think that directory will need to be writable for other GUI programs though - so we should include this fix.